cellxgene-census
Query the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated single-cell atlas. Best for population-scale queries, reference atlas comparisons. For analyzing your own data use scanpy or scvi-tools.
Packaged view
This page reorganizes the original catalog entry around fit, installability, and workflow context first. The original raw source lives below.
Install command
npx @skill-hub/cli install agentgptsmith-monadframework-cellxgene-census
Repository
Skill path: .claude/skills/scientific/cellxgene-census
Query the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated single-cell atlas. Best for population-scale queries, reference atlas comparisons. For analyzing your own data use scanpy or scvi-tools.
Open repositoryBest for
Primary workflow: Analyze Data & AI.
Technical facets: Full Stack, Data / AI.
Target audience: Development teams looking for install-ready agent workflows..
License: Unknown.
Original source
Catalog source: SkillHub Club.
Repository owner: agentgptsmith.
This is still a mirrored public skill entry. Review the repository before installing into production workflows.
What it helps with
- Install cellxgene-census into Claude Code, Codex CLI, Gemini CLI, or OpenCode workflows
- Review https://github.com/agentgptsmith/MonadFramework before adding cellxgene-census to shared team environments
- Use cellxgene-census for development workflows
Works across
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Sub-skills: 0.
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