cellxgene-census
This skill provides programmatic access to the CELLxGENE Census, a large single-cell genomics database with 61M+ cells. It enables querying expression data by cell type, tissue, or disease, integrates with PyTorch and scanpy, and supports both in-memory and out-of-core processing for different query sizes.
Packaged view
This page reorganizes the original catalog entry around fit, installability, and workflow context first. The original raw source lives below.
Install command
npx @skill-hub/cli install k-dense-ai-claude-scientific-skills-cellxgene-census
Repository
Skill path: scientific-skills/cellxgene-census
This skill provides programmatic access to the CELLxGENE Census, a large single-cell genomics database with 61M+ cells. It enables querying expression data by cell type, tissue, or disease, integrates with PyTorch and scanpy, and supports both in-memory and out-of-core processing for different query sizes.
Open repositoryBest for
Primary workflow: Research & Ops.
Technical facets: Full Stack, Backend, Data / AI.
Target audience: Research teams looking for install-ready agent workflows..
License: Unknown.
Original source
Catalog source: SkillHub Club.
Repository owner: K-Dense-AI.
This is still a mirrored public skill entry. Review the repository before installing into production workflows.
What it helps with
- Install cellxgene-census into Claude Code, Codex CLI, Gemini CLI, or OpenCode workflows
- Review https://github.com/K-Dense-AI/claude-scientific-skills before adding cellxgene-census to shared team environments
- Use cellxgene-census for research workflows
Works across
Favorites: 0.
Sub-skills: 0.
Aggregator: No.