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metabolomics-workbench-database

This skill provides direct REST API access to the NIH Metabolomics Workbench, enabling querying of 4,200+ metabolomics studies, metabolite structures, RefMet nomenclature standardization, and m/z searches. It includes detailed endpoint documentation with curl and Python examples for common workflows in metabolomics research.

Packaged view

This page reorganizes the original catalog entry around fit, installability, and workflow context first. The original raw source lives below.

Stars
15,482
Hot score
99
Updated
March 20, 2026
Overall rating
A8.1
Composite score
6.8
Best-practice grade
N/A

Install command

npx @skill-hub/cli install k-dense-ai-claude-scientific-skills-metabolomics-workbench-database
metabolomicsapi-wrapperscientific-databiomarker-discoverymass-spectrometry

Repository

K-Dense-AI/claude-scientific-skills

Skill path: scientific-skills/metabolomics-workbench-database

This skill provides direct REST API access to the NIH Metabolomics Workbench, enabling querying of 4,200+ metabolomics studies, metabolite structures, RefMet nomenclature standardization, and m/z searches. It includes detailed endpoint documentation with curl and Python examples for common workflows in metabolomics research.

Open repository

Best for

Primary workflow: Research & Ops.

Technical facets: Full Stack, Backend, Data / AI.

Target audience: Research teams looking for install-ready agent workflows..

License: Unknown.

Original source

Catalog source: SkillHub Club.

Repository owner: K-Dense-AI.

This is still a mirrored public skill entry. Review the repository before installing into production workflows.

What it helps with

  • Install metabolomics-workbench-database into Claude Code, Codex CLI, Gemini CLI, or OpenCode workflows
  • Review https://github.com/K-Dense-AI/claude-scientific-skills before adding metabolomics-workbench-database to shared team environments
  • Use metabolomics-workbench-database for research workflows

Works across

Claude CodeCodex CLIGemini CLIOpenCode

Favorites: 0.

Sub-skills: 0.

Aggregator: No.

metabolomics-workbench-database | SkillHub