pathml
Full-featured computational pathology toolkit. Use for advanced WSI analysis including multiplexed immunofluorescence (CODEX, Vectra), nucleus segmentation, tissue graph construction, and ML model training on pathology data. Supports 160+ slide formats. For simple tile extraction from H&E slides, histolab may be simpler.
Packaged view
This page reorganizes the original catalog entry around fit, installability, and workflow context first. The original raw source lives below.
Install command
npx @skill-hub/cli install k-dense-ai-claude-scientific-skills-pathml
Repository
Skill path: scientific-skills/pathml
Full-featured computational pathology toolkit. Use for advanced WSI analysis including multiplexed immunofluorescence (CODEX, Vectra), nucleus segmentation, tissue graph construction, and ML model training on pathology data. Supports 160+ slide formats. For simple tile extraction from H&E slides, histolab may be simpler.
Open repositoryBest for
Primary workflow: Analyze Data & AI.
Technical facets: Full Stack, Data / AI.
Target audience: Development teams looking for install-ready agent workflows..
License: Unknown.
Original source
Catalog source: SkillHub Club.
Repository owner: K-Dense-AI.
This is still a mirrored public skill entry. Review the repository before installing into production workflows.
What it helps with
- Install pathml into Claude Code, Codex CLI, Gemini CLI, or OpenCode workflows
- Review https://github.com/K-Dense-AI/claude-scientific-skills before adding pathml to shared team environments
- Use pathml for development workflows
Works across
Favorites: 0.
Sub-skills: 0.
Aggregator: No.