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SkillHub ClubAnalyze Data & AIData / AI

pyopenms

PyOpenMS provides Python bindings to OpenMS for mass spectrometry data analysis. It handles LC-MS/MS proteomics and metabolomics workflows including file I/O for formats like mzML and mzXML, signal processing, feature detection, peptide identification, and quantitative analysis. The documentation includes clear examples for common tasks.

Packaged view

This page reorganizes the original catalog entry around fit, installability, and workflow context first. The original raw source lives below.

Stars
139
Hot score
95
Updated
March 20, 2026
Overall rating
A8.1
Composite score
6.5
Best-practice grade
N/A

Install command

npx @skill-hub/cli install microck-ordinary-claude-skills-pyopenms
mass-spectrometryproteomicsmetabolomicspython-bindings

Repository

Microck/ordinary-claude-skills

Skill path: skills_categorized/lab-tools/pyopenms

PyOpenMS provides Python bindings to OpenMS for mass spectrometry data analysis. It handles LC-MS/MS proteomics and metabolomics workflows including file I/O for formats like mzML and mzXML, signal processing, feature detection, peptide identification, and quantitative analysis. The documentation includes clear examples for common tasks.

Open repository

Best for

Primary workflow: Analyze Data & AI.

Technical facets: Data / AI.

Target audience: Data teams looking for install-ready agent workflows..

License: Unknown.

Original source

Catalog source: SkillHub Club.

Repository owner: Microck.

This is still a mirrored public skill entry. Review the repository before installing into production workflows.

What it helps with

  • Install pyopenms into Claude Code, Codex CLI, Gemini CLI, or OpenCode workflows
  • Review https://github.com/Microck/ordinary-claude-skills before adding pyopenms to shared team environments
  • Use pyopenms for data workflows

Works across

Claude CodeCodex CLIGemini CLIOpenCode

Favorites: 0.

Sub-skills: 0.

Aggregator: No.

pyopenms | SkillHub