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pubchem-database
Query PubChem via PUG-REST API/PubChemPy (110M+ compounds). Search by name/CID/SMILES, retrieve properties, similarity/substructure searches, bioactivity, for cheminformatics.
Executing Plans
Execute detailed plans in batches with review checkpoints
quality-manager-qmr
Senior Quality Manager Responsible Person (QMR) for HealthTech and MedTech companies. Provides overall quality system responsibility, regulatory compliance oversight, management accountability, and strategic quality leadership. Use for quality system governance, regulatory compliance oversight, management responsibility, and quality strategic planning.
brenda-database
Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.
crack-hashcat
Advanced password recovery and hash cracking tool supporting multiple algorithms and attack modes. Use when: (1) Performing authorized password auditing and security assessments, (2) Recovering passwords from captured hashes in forensic investigations, (3) Testing password policy strength and complexity, (4) Validating encryption implementations, (5) Conducting security research on cryptographic hash functions, (6) Demonstrating password weakness in penetration testing reports.
skill-name
[REQUIRED] Comprehensive description of what this skill does and when to use it. Include: (1) Primary functionality, (2) Specific use cases, (3) Security operations context. Must include specific "Use when:" clause for skill discovery. Example: "SAST vulnerability analysis and remediation guidance using Semgrep and industry security standards. Use when: (1) Analyzing static code for security vulnerabilities, (2) Prioritizing security findings by severity, (3) Providing secure coding remediation, (4) Integrating security checks into CI/CD pipelines." Maximum 1024 characters.
ux-researcher-designer
UX research and design toolkit for Senior UX Designer/Researcher including data-driven persona generation, journey mapping, usability testing frameworks, and research synthesis. Use for user research, persona creation, journey mapping, and design validation.
erk-planning
This skill documents plan management in erk. Use when creating, updating, or working with erk-plan GitHub PRs. Covers plan structure, the planning workflow, and when to update vs create new plans.
agent-builder
Imported from https://github.com/seanchiuai/PRD-generator.
mcp-management
Manage Model Context Protocol (MCP) servers - discover, analyze, and execute tools/prompts/resources from configured MCP servers. Use when working with MCP integrations, need to discover available MCP capabilities, filter MCP tools for specific tasks, execute MCP tools programmatically, access MCP prompts/resources, or implement MCP client functionality. Supports intelligent tool selection, multi-server management, and context-efficient capability discovery.
dokkado
Five-phase reasoning protocol based on Musashi's Book of Five Rings. Ground (morphemic extraction), Water (pattern matching), Fire (unified derivation), Wind (predictions), Void (meta-closure). Use for cross-disciplinary insight discovery.
user_research
Plan and structure moderated or unmoderated user research sessions that target the given persona and objectives.
debug-plan
Create debug test plan from user input. Use when planning browser debug sessions with Chrome DevTools. Parses prompt for URL/target, identifies interactions to test (clicks, inputs, flows), confirms plan with user via HITL, creates specific test steps (navigate, click, fill, verify). Outputs URL and test plan for debug execution.
github-project-management
Comprehensive GitHub project management with swarm-coordinated issue tracking, project board automation, and sprint planning
phase0-discovery
Imported from https://github.com/turbobeest/squawk.
plan-expert
Planning and architecture decision domain expert. Knows about: - Creating ADRs (Architecture Decision Records) - Creating technical specifications - Listing and discovering planning artifacts - Transforming plans into executable VTM tasks - Integrating with research tools (thinking-partner) Use when: - User wants to document an architectural decision - User needs to create a technical specification - User wants to explore or list existing ADRs/specs - User is ready to convert planning docs into tasks - User needs research before making a decision
prd-audit
Imported from https://github.com/turbobeest/squawk.
research
Use when you need to research, analyze, and plan technical solutions that are scalable, secure, and maintainable.
research
Imported from https://github.com/hotriluan/alkanacoating.
task-workflow
Complete task lifecycle management system with state-based workflow. Define, refine, implement, and review tasks with automated quality gates and intelligent discovery.
architect-agent-skill
Technical workflow for architect-agent - PRD creation with mandatory database context, entity design with Zod, iteration review, and agent coordination in the iterative v2.0 system
story-planning
Imported from https://github.com/Mharbulous/SyncoPaid.
speckit-author
Creates SpecKit specifications (spec.md, plan.md) in feature/release/hotfix worktrees. Detailed implementation guidance. Use when: In worktree, need specifications, implementation planning Triggers: write spec, create plan, feature specification
content-research-writer
Imported from https://github.com/ghealysr/nicole-assistant.